STRINGSTRING
JOFV01000002_gene547 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene547" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene547annotation not available (396 aa)    
Predicted Functional Partners:
JOFV01000002_gene546
annotation not available (419 aa)
 
        0.915
JOFV01000002_gene548
annotation not available (430 aa)
 
        0.903
JOFV01000002_gene544
annotation not available (440 aa)
 
          0.901
JOFV01000002_gene545
annotation not available (251 aa)
 
          0.885
JOFV01000003_gene1520
annotation not available (316 aa)
 
        0.571
JOFV01000002_gene543
annotation not available (221 aa)
              0.494
JOFV01000002_gene549
annotation not available (39 aa)
              0.460
JOFV01000002_gene542
annotation not available (579 aa)
              0.423
JOFV01000002_gene550
annotation not available (329 aa)
 
          0.419
JOFV01000002_gene541
annotation not available (567 aa)
   
        0.404
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
Server load: low (16%) [HD]