STRINGSTRING
JOFV01000002_gene600 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene600" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene600annotation not available (185 aa)    
Predicted Functional Partners:
JOFV01000002_gene601
annotation not available (422 aa)
 
  0.999
JOFV01000006_gene2634
annotation not available (429 aa)
 
  0.996
JOFV01000006_gene2633
annotation not available (318 aa)
 
 
  0.994
JOFV01000006_gene2587
annotation not available (372 aa)
 
 
  0.990
JOFV01000006_gene2588
annotation not available (502 aa)
 
 
  0.977
JOFV01000005_gene2149
annotation not available (552 aa)
 
   
  0.958
JOFV01000005_gene2147
annotation not available (213 aa)
 
 
  0.957
JOFV01000006_gene2605
annotation not available (790 aa)
 
 
  0.936
JOFV01000006_gene2629
annotation not available (242 aa)
 
 
  0.933
JOFV01000010_gene1137
annotation not available (514 aa)
 
   
  0.905
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
Server load: low (9%) [HD]