STRINGSTRING
JOFV01000002_gene604 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene604" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene604annotation not available (211 aa)    
Predicted Functional Partners:
JOFV01000002_gene603
annotation not available (446 aa)
   
  0.950
JOFV01000002_gene542
annotation not available (579 aa)
    0.746
JOFV01000003_gene1657
annotation not available (721 aa)
       
  0.742
JOFV01000002_gene516
annotation not available (384 aa)
    0.723
JOFV01000001_gene2069
annotation not available (455 aa)
 
    0.722
JOFV01000001_gene2015
annotation not available (498 aa)
 
    0.685
JOFV01000017_gene97
annotation not available (791 aa)
       
  0.671
JOFV01000001_gene1957
annotation not available (480 aa)
    0.659
JOFV01000009_gene267
annotation not available (382 aa)
 
 
    0.654
JOFV01000007_gene2862
annotation not available (440 aa)
       
  0.649
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
Server load: low (13%) [HD]