STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL44802.1Molecular chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)    
Predicted Functional Partners:
dnaK
Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
GrpE
Molecular chaperone GrpE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
groEL
Chaperonin GroEL; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.995
KPL46898.1
Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
KPL44972.1
Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
KPL45875.1
Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
Mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.755
KPL46058.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.751
KPL46079.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.751
AOB57_13695
PDZ domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.725
Your Current Organism:
Methanosarcina flavescens
NCBI taxonomy Id: 1715806
Other names: DSM 100822, JCM 30921, M. flavescens, Methanosarcina flavescens Kern et al. 2016, Methanosarcina sp. E03.2, strain E03.2
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