STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4V02_05820Unannotated protein. (513 aa)    
Predicted Functional Partners:
GCA_001705305_01023
Unannotated protein.
 
 0.986
B4V02_24680
Unannotated protein.
 
 0.986
B4V02_06680
Unannotated protein.
 
 
 0.947
B4V02_05330
Unannotated protein.
 
  
 0.946
nanE
Unannotated protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
    
 0.919
B4V02_09520
Unannotated protein.
  
 
 0.917
GCA_001705305_01005
Unannotated protein.
 
  
 0.798
B4V02_23295
Unannotated protein.
 
  
 0.794
B4V02_00075
Unannotated protein.
   
  
 0.704
B4V02_16770
Unannotated protein.
   
  
 0.704
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.