STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001600Bardet-Biedl syndrome 9. (893 aa)    
Predicted Functional Partners:
bbs1
Bardet-Biedl syndrome 1.
    
 0.998
ttc8
Tetratricopeptide repeat domain 8.
  
 
 0.998
ENSENLP00000011844
Bardet-Biedl syndrome 7.
    
 0.997
bbs2
Bardet-Biedl syndrome 2.
   
 0.997
ENSENLP00000027392
Bardet-Biedl syndrome 4.
   
 0.997
bbs5
Bardet-Biedl syndrome 5.
   
 0.990
ENSENLP00000046591
BBSome interacting protein 1.
    
 0.990
lztfl1
Leucine zipper transcription factor like 1.
    
 0.971
klhl40
Kelch like family member 40.
   
 0.949
klhl41
Kelch like family member 41.
   
 0.949
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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