LOC115045481 protein (Echeneis naucrates) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC115045481

Chemokine-like receptor 1. (377 aa)

Predicted Functional Partners:

ENSENLP00000000895

0.652

ENSENLP00000011511

0.652

GNAS

0.652

ENSENLP00000012476

0.616

loxl1

0.597

LOC115048636

0.584

LOC115049357

0.584

LOC115036408

0.584

LOC115042405

0.584

has1

0.578

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000000895	ENSENLP00000011511	ENSENLP00000000895	ENSENLP00000011511	annotation not available	annotation not available	0.885
ENSENLP00000000895	ENSENLP00000012476	ENSENLP00000000895	ENSENLP00000012476	annotation not available	F2R like thrombin or trypsin receptor 3.	0.770
ENSENLP00000000895	LOC115036408	ENSENLP00000000895	ENSENLP00000027010	annotation not available	Guanine nucleotide-binding protein subunit alpha-11-like.	0.468
ENSENLP00000000895	LOC115042405	ENSENLP00000000895	ENSENLP00000030927	annotation not available	Guanine nucleotide-binding protein subunit alpha-11.	0.468
ENSENLP00000000895	LOC115045481	ENSENLP00000000895	ENSENLP00000003045	annotation not available	Chemokine-like receptor 1.	0.652
ENSENLP00000000895	LOC115048636	ENSENLP00000000895	ENSENLP00000009263	annotation not available	Guanine nucleotide-binding protein subunit alpha-14-like.	0.466
ENSENLP00000000895	LOC115049357	ENSENLP00000000895	ENSENLP00000009280	annotation not available	Guanine nucleotide-binding protein G(q) subunit alpha.	0.467
ENSENLP00000011511	ENSENLP00000000895	ENSENLP00000011511	ENSENLP00000000895	annotation not available	annotation not available	0.885
ENSENLP00000011511	ENSENLP00000012476	ENSENLP00000011511	ENSENLP00000012476	annotation not available	F2R like thrombin or trypsin receptor 3.	0.770
ENSENLP00000011511	GNAS	ENSENLP00000011511	ENSENLP00000018326	annotation not available	GNAS complex locus.	0.885
ENSENLP00000011511	LOC115036408	ENSENLP00000011511	ENSENLP00000027010	annotation not available	Guanine nucleotide-binding protein subunit alpha-11-like.	0.468
ENSENLP00000011511	LOC115042405	ENSENLP00000011511	ENSENLP00000030927	annotation not available	Guanine nucleotide-binding protein subunit alpha-11.	0.468
ENSENLP00000011511	LOC115045481	ENSENLP00000011511	ENSENLP00000003045	annotation not available	Chemokine-like receptor 1.	0.652
ENSENLP00000011511	LOC115048636	ENSENLP00000011511	ENSENLP00000009263	annotation not available	Guanine nucleotide-binding protein subunit alpha-14-like.	0.467
ENSENLP00000011511	LOC115049357	ENSENLP00000011511	ENSENLP00000009280	annotation not available	Guanine nucleotide-binding protein G(q) subunit alpha.	0.464
ENSENLP00000012476	ENSENLP00000000895	ENSENLP00000012476	ENSENLP00000000895	F2R like thrombin or trypsin receptor 3.	annotation not available	0.770
ENSENLP00000012476	ENSENLP00000011511	ENSENLP00000012476	ENSENLP00000011511	F2R like thrombin or trypsin receptor 3.	annotation not available	0.770
ENSENLP00000012476	GNAS	ENSENLP00000012476	ENSENLP00000018326	F2R like thrombin or trypsin receptor 3.	GNAS complex locus.	0.770
ENSENLP00000012476	LOC115036408	ENSENLP00000012476	ENSENLP00000027010	F2R like thrombin or trypsin receptor 3.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.736
ENSENLP00000012476	LOC115042405	ENSENLP00000012476	ENSENLP00000030927	F2R like thrombin or trypsin receptor 3.	Guanine nucleotide-binding protein subunit alpha-11.	0.736