STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000010463F-box and leucine-rich repeat protein 13. (544 aa)    
Predicted Functional Partners:
ENSENLP00000049820
S-phase kinase-associated protein 1.
   
 0.946
cul1
Cullin 1.
    
 0.905
rbx1
Ring-box 1.
    
 0.875
ENSENLP00000037898
Adenylate kinase 8.
     
 0.853
CUL3
Cullin-3-like.
    
 0.836
LOC115053551
Cullin-3.
    
 0.836
ENSENLP00000011814
Tetraspanin 10.
   
    0.776
LOC115058487
NEDD8.
    
 0.776
LOC115057126
NEDD8-like.
    
 0.776
ENSENLP00000040457
COMM domain containing 4.
    
 0.741
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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