STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO66108.1Uroporphyrinogen decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the uroporphyrinogen decarboxylase family. (390 aa)    
Predicted Functional Partners:
KUO61328.1
HemD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.958
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 0.907
KUO66109.1
Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.882
KUO66106.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.874
KUO66110.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.841
KUO66104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.840
KUO66997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.810
KUO65844.1
Bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; In acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.717
KUO66107.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.679
KUO66103.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.639
Your Current Organism:
Gracilibacter sp. BRHc7a
NCBI taxonomy Id: 1734398
Other names: G. sp. BRH_c7a, Gracilibacter sp. BRH_c7a
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