node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KQQ28885.1 | KQQ29014.1 | ASF54_09760 | ASF54_01080 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
KQQ28885.1 | rplB | ASF54_09760 | ASF54_15200 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.915 |
KQQ28885.1 | rplD | ASF54_09760 | ASF54_15190 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.895 |
KQQ28885.1 | rplF | ASF54_09760 | ASF54_15255 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.890 |
KQQ28885.1 | rplO | ASF54_09760 | ASF54_15275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.907 |
KQQ28885.1 | rplP | ASF54_09760 | ASF54_15220 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.906 |
KQQ28885.1 | rpsB | ASF54_09760 | ASF54_03240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.903 |
KQQ28885.1 | rpsC | ASF54_09760 | ASF54_15215 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.915 |
KQQ28885.1 | rpsD | ASF54_09760 | ASF54_01575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.909 |
KQQ28885.1 | rpsK | ASF54_09760 | ASF54_15315 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.896 |
KQQ29014.1 | KQQ28885.1 | ASF54_01080 | ASF54_09760 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
KQQ29014.1 | rplB | ASF54_01080 | ASF54_15200 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.991 |
KQQ29014.1 | rplD | ASF54_01080 | ASF54_15190 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.997 |
KQQ29014.1 | rplF | ASF54_01080 | ASF54_15255 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.995 |
KQQ29014.1 | rplO | ASF54_01080 | ASF54_15275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.994 |
KQQ29014.1 | rplP | ASF54_01080 | ASF54_15220 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.990 |
KQQ29014.1 | rpsB | ASF54_01080 | ASF54_03240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
KQQ29014.1 | rpsC | ASF54_01080 | ASF54_15215 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.998 |
KQQ29014.1 | rpsD | ASF54_01080 | ASF54_01575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
KQQ29014.1 | rpsK | ASF54_01080 | ASF54_15315 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.996 |