STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRE15896.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)    
Predicted Functional Partners:
KRD95821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.994
KRE09301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.993
KRE17891.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.992
KRE15950.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
KRE18326.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.991
KRE15895.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
KRE04253.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.963
KRE06014.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.951
KRE11311.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
 0.949
KRE00646.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.938
Your Current Organism:
Bosea sp. Root381
NCBI taxonomy Id: 1736524
Other names: B. sp. Root381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.