STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRA12959.1Cell shape determination protein CcmA; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)    
Predicted Functional Partners:
KRA07600.1
Desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
KRA04895.1
Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.575
KRA18355.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.564
KRA04904.1
Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.564
KRA07009.1
Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.528
KRA14048.1
NrdH-redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
KRA18331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.495
KRA08171.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
KRA12960.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
KRA12915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
Your Current Organism:
Acidovorax sp. Root568
NCBI taxonomy Id: 1736565
Other names: A. sp. Root568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.