STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC06981.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)    
Predicted Functional Partners:
OCC06980.1
Sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.776
OCC06982.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OCC06979.1
Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.660
OCC06978.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.657
OCC04914.1
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.636
OCC00754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.620
OCC03052.1
Bifunctional glucose-1-phosphatase/inositol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.611
OCC06498.1
Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.586
OCC01213.1
Transaldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.582
OCC02530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.566
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.