OFR40310.1 protein (Porphyromonas sp. HMSC065F10)

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

OFR40310.1

RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)

Predicted Functional Partners:

rpoC

0.938

rpoA

0.927

rpoB

0.927

OFR33457.1

0.848

OFR41866.1

0.840

gcvH

0.740

purE

0.592

OFR41089.1

0.591

OFR40311.1

0.551

OFR40417.1

0.534

Your Current Organism:

Porphyromonas sp. HMSC065F10

NCBI taxonomy Id: 1739394
Other names: P. sp. HMSC065F10

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OFR33457.1	OFR40310.1	HMPREF2890_07135	HMPREF2890_01155	RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
OFR33457.1	OFR41089.1	HMPREF2890_07135	HMPREF2890_00845	RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
OFR33457.1	rpoA	HMPREF2890_07135	HMPREF2890_03570	RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
OFR33457.1	rpoB	HMPREF2890_07135	HMPREF2890_06150	RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
OFR33457.1	rpoC	HMPREF2890_07135	HMPREF2890_06155	RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
OFR40310.1	OFR33457.1	HMPREF2890_01155	HMPREF2890_07135	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase Rpb6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
OFR40310.1	OFR40311.1	HMPREF2890_01155	HMPREF2890_01160	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.551
OFR40310.1	OFR40417.1	HMPREF2890_01155	HMPREF2890_01400	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
OFR40310.1	OFR41089.1	HMPREF2890_01155	HMPREF2890_00845	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
OFR40310.1	OFR41866.1	HMPREF2890_01155	HMPREF2890_08495	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.840
OFR40310.1	gcvH	HMPREF2890_01155	HMPREF2890_01150	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.	0.740
OFR40310.1	purE	HMPREF2890_01155	HMPREF2890_01145	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).	0.592
OFR40310.1	rpoA	HMPREF2890_01155	HMPREF2890_03570	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.927
OFR40310.1	rpoB	HMPREF2890_01155	HMPREF2890_06150	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.927
OFR40310.1	rpoC	HMPREF2890_01155	HMPREF2890_06155	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.938
OFR40311.1	OFR40310.1	HMPREF2890_01160	HMPREF2890_01155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
OFR40311.1	gcvH	HMPREF2890_01160	HMPREF2890_01150	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.	0.445
OFR40417.1	OFR40310.1	HMPREF2890_01400	HMPREF2890_01155	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
OFR40417.1	OFR41089.1	HMPREF2890_01400	HMPREF2890_00845	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
OFR40417.1	OFR41866.1	HMPREF2890_01400	HMPREF2890_08495	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746