STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_00223Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_001509585_01780
Unannotated protein.
  
 
 0.856
GCA_001509585_00218
Unannotated protein.
 
     0.498
GCA_001509585_02392
Unannotated protein.
  
     0.493
GCA_001509585_00221
Unannotated protein.
  
    0.432
GCA_001509585_00219
Unannotated protein.
       0.429
GCA_001509585_00220
Unannotated protein.
       0.429
GCA_001509585_00222
Unannotated protein.
       0.429
GCA_001509585_03086
Unannotated protein.
     
 0.425
GCA_001509585_01442
Unannotated protein.
    
   0.404
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.