STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_01979Unannotated protein. (492 aa)    
Predicted Functional Partners:
GCA_001509585_02279
Unannotated protein.
   
 0.926
GCA_001509585_04595
Unannotated protein.
 
      0.898
GCA_001509585_01260
Unannotated protein.
 
      0.889
GCA_001509585_04229
Unannotated protein.
  
 
 0.834
GCA_001509585_01983
Unannotated protein.
 
  0.793
GCA_001509585_01995
Unannotated protein.
     
 0.660
GCA_001509585_02662
Unannotated protein.
 
0.652
GCA_001509585_03247
Unannotated protein.
   
 
 0.638
GCA_001509585_04602
Unannotated protein.
  
 
 0.603
GCA_001509585_04679
Unannotated protein.
  
 
 0.603
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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