STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6QHP7Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (609 aa)    
Predicted Functional Partners:
A0A2J6QB92
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 0.979
A0A2J6PDG6
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.964
A0A2J6Q2B9
Vps5-domain-containing protein.
    
 
 0.947
A0A2J6PU81
Vacuolar protein sorting-associated protein 26B-A.
    
 
 0.901
A0A2J6QK53
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.746
A0A2J6QF26
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.653
A0A2J6Q3U2
PX domain-containing protein.
    
 
 0.652
A0A2J6QD02
Mannose 6-phosphate receptor domain-containing protein.
    
 0.619
A0A2J6PZK4
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.582
A0A2J6QCB3
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.572
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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