STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086725_00519Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_900086725_00520
Unannotated protein.
  0.966
GCA_900086725_00445
Unannotated protein.
  
 0.872
GCA_900086725_01775
Unannotated protein.
  
0.872
GCA_900086725_02720
Unannotated protein.
  
0.872
GCA_900086725_02122
Unannotated protein.
 
 
 
0.850
GCA_900086725_03701
Unannotated protein.
  
 0.833
GCA_900086725_01926
Unannotated protein.
 
  0.812
GCA_900086725_00521
Unannotated protein.
 
     0.808
GCA_900086725_03287
Unannotated protein.
 0.777
GCA_900086725_02819
Unannotated protein.
  
0.772
Your Current Organism:
Bariatricus massiliensis
NCBI taxonomy Id: 1745713
Other names: B. massiliensis, CSUR P2179, DSM 101783, Ruminococcus sp. AT12, strain AT12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.