STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWV52593.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (770 aa)    
Predicted Functional Partners:
KWV52597.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
KWV56640.1
Protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
KWV56293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.913
KWV52591.1
Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.894
KWV52589.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.843
KWV52612.1
Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.829
KWV52590.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.784
KWV52595.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.781
KWV52594.1
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.757
KWV50040.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.756
Your Current Organism:
Bradyrhizobium macuxiense
NCBI taxonomy Id: 1755647
Other names: B. macuxiense, Bradyrhizobium sp. BR 10303, HAMBI:3602, strain BR 10303
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.