STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN02949497_4429Glycerophosphoryl diester phosphodiesterase. (420 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.929
SAMN02949497_0373
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
 
 
 0.872
SAMN02949497_1068
Alkaline phosphatase D.
  
 
 0.824
SAMN02949497_0216
L-2-hydroxyglutarate oxidase.
    
 0.738
SAMN02949497_0873
Glycolate oxidase iron-sulfur subunit.
  
 
  0.726
SAMN02949497_1335
Glycolate oxidase iron-sulfur subunit.
  
 
  0.726
SAMN02949497_0645
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
  
 
 0.706
SAMN02949497_2499
Esterase-like activity of phytase.
 
  
 0.704
SAMN02949497_1836
Lysophospholipase, alpha-beta hydrolase superfamily.
    
 0.685
SAMN02949497_3146
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
    
 
 0.681
Your Current Organism:
Methylomagnum ishizawai
NCBI taxonomy Id: 1760988
Other names: DSM 29768, JCM 18894, KCTC 4681, M. ishizawai, Methylocaldum sp. 175, Methylomagnum ishizawai Khalifa et al. 2015 emend. Frindte et al. 2017, NBRC 109438, strain RS11D-Pr
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