STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM16031.1Putrescine transport system substrate-binding protein. (367 aa)    
Predicted Functional Partners:
SFN41870.1
Putrescine transport system permease protein.
 
 0.928
SFM53244.1
Putrescine transport system permease protein.
 
 0.900
SFM53231.1
Putrescine transport system permease protein.
 
 
 0.896
SFN41841.1
Putrescine transport system permease protein.
 
 
 0.896
SFM16620.1
Spermidine/putrescine transport system permease protein.
 
 0.883
SFN33400.1
Spermidine/putrescine transport system permease protein.
 
 0.871
potA-7
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.858
potA-4
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.853
SFN33419.1
Spermidine/putrescine transport system permease protein.
 
 
  0.839
SFM16639.1
Spermidine/putrescine transport system permease protein.
 
 
  0.825
Your Current Organism:
Pseudomonas sp. ok602
NCBI taxonomy Id: 1761898
Other names: P. sp. ok602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.