STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM92673.1DUF2300 domain-containing protein YfaQ. (539 aa)    
Predicted Functional Partners:
SFM92686.1
Uncharacterized conserved protein YfaP, DUF2135 family.
  
  
 0.936
SFM92640.1
Hypothetical protein.
  
  
 0.895
SFM92657.1
Hypothetical protein.
  
  
 0.895
SFM92618.1
Uncharacterized conserved protein YfaA, DUF2138 family.
  
  
 0.893
SFM92594.1
Uncharacterized conserved protein YfaP, DUF2135 family.
  
  
 0.839
Your Current Organism:
Pseudomonas sp. ok602
NCBI taxonomy Id: 1761898
Other names: P. sp. ok602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.