STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM95402.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
SDO28173.1
Phage shock protein A (PspA) family protein.
  
 
 0.964
SDM95346.1
Von Willebrand factor type A domain-containing protein.
       0.811
SDP66805.1
Signal transduction histidine kinase.
  
 
 0.787
SDM95372.1
Hypothetical protein.
      0.782
SDO12153.1
Putative membrane protein.
  
    0.779
SDO87530.1
GAF sensor hybrid histidine kinase.
   
 
 0.732
SDO13584.1
PAS domain S-box-containing protein.
   
   0.678
SDM95320.1
Hypothetical protein.
       0.584
SDN06478.1
Protein of unknown function.
  
    0.470
SDN42346.1
Thioredoxin reductase (NADPH).
   
   0.422
Your Current Organism:
Streptomyces sp. cf386
NCBI taxonomy Id: 1761904
Other names: S. sp. cf386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.