node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SERP0074 | SERP1356 | SERP0074 | SERP1356 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.520 |
SERP0074 | rho | SERP0074 | SERP1728 | Hypothetical protein; Identified by Glimmer2; putative. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.511 |
SERP0074 | rnpA | SERP0074 | SERP0002 | Hypothetical protein; Identified by Glimmer2; putative. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.553 |
SERP0074 | yidC1 | SERP0074 | SERP2021 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.566 |
SERP0074 | yidC2 | SERP0074 | SERP1697 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.566 |
SERP0714 | SERP1356 | SERP0714 | SERP1356 | Conserved hypothetical protein TIGR00095; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095. | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.547 |
SERP0714 | rnpA | SERP0714 | SERP0002 | Conserved hypothetical protein TIGR00095; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.443 |
SERP1354 | SERP1355 | SERP1354 | SERP1355 | Conserved hypothetical protein; Identified by similarity to OMNI:SA1840. | Identified by match to protein family HMM PF00293. | 0.883 |
SERP1354 | SERP1356 | SERP1354 | SERP1356 | Conserved hypothetical protein; Identified by similarity to OMNI:SA1840. | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.832 |
SERP1355 | SERP1354 | SERP1355 | SERP1354 | Identified by match to protein family HMM PF00293. | Conserved hypothetical protein; Identified by similarity to OMNI:SA1840. | 0.883 |
SERP1355 | SERP1356 | SERP1355 | SERP1356 | Identified by match to protein family HMM PF00293. | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.832 |
SERP1355 | secE | SERP1355 | SERP0176 | Identified by match to protein family HMM PF00293. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.549 |
SERP1356 | SERP0074 | SERP1356 | SERP0074 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.520 |
SERP1356 | SERP0714 | SERP1356 | SERP0714 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Conserved hypothetical protein TIGR00095; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095. | 0.547 |
SERP1356 | SERP1354 | SERP1356 | SERP1354 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Conserved hypothetical protein; Identified by similarity to OMNI:SA1840. | 0.832 |
SERP1356 | SERP1355 | SERP1356 | SERP1355 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Identified by match to protein family HMM PF00293. | 0.832 |
SERP1356 | rho | SERP1356 | SERP1728 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.556 |
SERP1356 | rnpA | SERP1356 | SERP0002 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.887 |
SERP1356 | secE | SERP1356 | SERP0176 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.649 |
SERP1356 | serS | SERP1356 | SERP2545 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.612 |