STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP1729Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. (475 aa)    
Predicted Functional Partners:
adh
Alcohol dehydrogenase, zinc-containing; Identified by similarity to EGAD:15881; match to protein family HMM PF00107.
 
 
 0.976
SERP2172
acetyl-CoA synthetase, putative; Identified by similarity to EGAD:18603; match to protein family HMM PF00501.
  
 0.938
SERP2159
Aminotransferase, class III; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.932
SERP0389
Alcohol dehydrogenase, iron-containing; Identified by similarity to SP:P17547; match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.929
aldA-1
Aldehyde dehydrogenase; Identified by similarity to EGAD:18867; match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.922
SERP2469
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107.
 
 0.921
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.918
SERP1962
Alcohol dehydrogenase, zinc-containing; Identified by similarity to EGAD:15882; match to protein family HMM PF00107.
   
 0.913
aldA-2
Aldehyde dehydrogenase; Identified by similarity to EGAD:15875; match to protein family HMM PF00171.
  
  
 
0.913
SERP0974
Acylphosphatase; Identified by match to protein family HMM PF00708.
    
 0.903
Your Current Organism:
Staphylococcus epidermidis
NCBI taxonomy Id: 176279
Other names: S. epidermidis RP62A, Staphylococcus epidermidis ATCC 35984, Staphylococcus epidermidis RP62A, Staphylococcus epidermidis str. RP62A, Staphylococcus epidermidis strain RP62A
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