Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Atu3162 | Atu3163 | Transcriptional regulator, LacI family. | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | 0.566 |
Atu3162 | Atu3164 | Transcriptional regulator, LacI family. | Dehydrogenase; Involved in galactitol catabolism. Catalyzes the oxidation of galactitol to D-tagatose. Can also catalyze the oxidation of D-sorbitol to D-fructose. | 0.582 |
Atu3163 | Atu3162 | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | Transcriptional regulator, LacI family. | 0.566 |
Atu3163 | Atu3164 | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | Dehydrogenase; Involved in galactitol catabolism. Catalyzes the oxidation of galactitol to D-tagatose. Can also catalyze the oxidation of D-sorbitol to D-fructose. | 0.738 |
Atu3163 | Atu3165 | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | ABC transporter, substrate binding protein (sorbitol/mannitol). | 0.403 |
Atu3163 | Atu4870 | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | NADP-dependent quinone oxidoreductase. | 0.507 |
Atu3164 | Atu3162 | Dehydrogenase; Involved in galactitol catabolism. Catalyzes the oxidation of galactitol to D-tagatose. Can also catalyze the oxidation of D-sorbitol to D-fructose. | Transcriptional regulator, LacI family. | 0.582 |
Atu3164 | Atu3163 | Dehydrogenase; Involved in galactitol catabolism. Catalyzes the oxidation of galactitol to D-tagatose. Can also catalyze the oxidation of D-sorbitol to D-fructose. | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | 0.738 |
Atu3164 | Atu3165 | Dehydrogenase; Involved in galactitol catabolism. Catalyzes the oxidation of galactitol to D-tagatose. Can also catalyze the oxidation of D-sorbitol to D-fructose. | ABC transporter, substrate binding protein (sorbitol/mannitol). | 0.725 |
Atu3165 | Atu3163 | ABC transporter, substrate binding protein (sorbitol/mannitol). | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | 0.403 |
Atu3165 | Atu3164 | ABC transporter, substrate binding protein (sorbitol/mannitol). | Dehydrogenase; Involved in galactitol catabolism. Catalyzes the oxidation of galactitol to D-tagatose. Can also catalyze the oxidation of D-sorbitol to D-fructose. | 0.725 |
Atu4870 | Atu3163 | NADP-dependent quinone oxidoreductase. | Zinc-binding dehydrogenase; Involved in D-altritol catabolism. Catalyzes the oxidation of D-altritol to D-tagatose. | 0.507 |