STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25868.1Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)    
Predicted Functional Partners:
ALI27953.1
Enoyl-[acyl-carrier-protein] reductase of FASI; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI; [Acyl-carrier-protein] malonyl transferase of FASI; [Acyl-carrier-protein] palmitoyl transferase of FASI; Acyl carrier protein of FASI; 3-oxoacyl-[acyl-carrier-protein] reductase of FASI; 3-oxoacyl-[acyl-carrier-protein] synthase of FASI.
  
 0.734
ALI25867.1
Hypothetical protein; Belongs to the major facilitator superfamily.
       0.665
ALI27170.1
Hypothetical protein.
 
 0.608
ALI28844.1
GlnQ.
 
 0.571
ALI25366.1
Sensor histidine kinase.
  
 0.559
htpG
HtpG; Molecular chaperone. Has ATPase activity.
  
 0.551
ALI27637.1
Thiamine pyrophosphate-requiring enzyme.
 
 0.550
glsA
Glutaminase; Belongs to the glutaminase family.
  
 0.540
ALI23903.1
Hypothetical protein.
  
 
 0.538
ALI25045.1
Hypothetical protein.
  
 
 0.535
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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