STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tapH+ antiporter integral membrane transport protein; Efflux pump that contributes to intrinsic antibiotic resistance. The pump uses the electrochemical gradient as a source of energy. Confers low-level resistance to tetracycline and to several aminoglycosides, including streptomycin, gentamicin, 2'-N- ethylnetilmicin and 6'-N-ethylnetilmicin. (409 aa)    
Predicted Functional Partners:
ALI28253.1
Glycolate oxidase, subunit GlcD.
  
    0.907
ALI27120.1
Enhanced intracellular survival protein.
  
  
 0.748
ALI28775.1
Transporter, putative.
  
     0.745
ALI24495.1
Putative TRANSCRIPTIONAL REGULATORY PROTEIN.
  
   
 0.694
ALI24166.1
MFS permease.
  
     0.666
iniC
IniC.
 
   
 0.645
ALI28250.1
Bacterial luciferase family protein.
       0.602
iniA
IniA.
  
     0.590
ALI28251.1
Uracil-DNA glycosylase, family 5.
  
    0.568
ALI28294.1
ABC-type multidrug transport system, ATPase component.
 
   
 0.556
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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