STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI28477.1Putative DNA-binding protein. (141 aa)    
Predicted Functional Partners:
acg
Dinucleotide-utilizing enzyme family 2; Involved in molybdopterin and thiamine biosynthesis.
  
  
 0.709
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.700
devS
DevS.
  
    0.690
ALI28479.1
Universal stress protein family.
  
  
 0.620
devR
DevR.
  
  
 0.587
ALI28263.1
Helicase-like protein; Superfamily I DNA and RNA helicases and helicase subunits.
 
     0.508
ALI26483.1
Hypothetical protein.
  
    0.459
ALI28245.1
Hypothetical protein.
     0.450
ALI26000.1
Cyclic nucleotide-binding protein.
  
  
 0.435
ALI28361.1
Nitrate/nitrite transporter.
  
  
 0.432
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: low (30%) [HD]