STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001559865_00335Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_001559865_00334
Unannotated protein.
 0.999
GCA_001559865_01984
Unannotated protein.
  
 0.987
GCA_001559865_02896
Unannotated protein.
  
 
 0.934
GCA_001559865_02388
Unannotated protein.
  
  
 0.924
GCA_001559865_02898
Unannotated protein.
 
 
 0.921
GCA_001559865_01603
Unannotated protein.
  
 
 0.920
GCA_001559865_03709
Unannotated protein.
 
 
 0.917
GCA_001559865_02899
Unannotated protein.
 
 
 0.914
GCA_001559865_02900
Unannotated protein.
  
 0.911
GCA_001559865_01649
Unannotated protein.
  
 
 0.883
Your Current Organism:
Abyssisolibacter fermentans
NCBI taxonomy Id: 1766203
Other names: A. fermentans, Clostridiales bacterium MCWD3, KCTC 15524, strain MCWD3
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