STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001559865_01226Unannotated protein. (158 aa)    
Predicted Functional Partners:
GCA_001559865_00095
Unannotated protein.
     
 0.749
GCA_001559865_02189
Unannotated protein.
   
    0.664
GCA_001559865_00119
Unannotated protein.
   
    0.594
GCA_001559865_01941
Unannotated protein.
   
    0.594
GCA_001559865_01225
Unannotated protein.
       0.578
GCA_001559865_01227
Unannotated protein.
       0.565
GCA_001559865_02234
Unannotated protein.
   
    0.508
GCA_001559865_03028
Unannotated protein.
   
    0.487
GCA_001559865_03243
Unannotated protein.
   
    0.487
Your Current Organism:
Abyssisolibacter fermentans
NCBI taxonomy Id: 1766203
Other names: A. fermentans, Clostridiales bacterium MCWD3, KCTC 15524, strain MCWD3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.