STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001559865_01541Unannotated protein. (221 aa)    
Predicted Functional Partners:
GCA_001559865_02686
Unannotated protein.
    
  0.784
GCA_001559865_00347
Unannotated protein.
     
 0.536
GCA_001559865_02575
Unannotated protein.
   
 
 0.474
GCA_001559865_04104
Unannotated protein.
    
   0.470
GCA_001559865_02676
Unannotated protein.
    
 0.461
GCA_001559865_01544
Unannotated protein.
   
  0.460
GCA_001559865_01542
Unannotated protein.
       0.449
GCA_001559865_04158
Unannotated protein.
  
 
  0.434
GCA_001559865_04147
Unannotated protein.
  
 
 0.416
GCA_001559865_03853
Unannotated protein.
    
  0.414
Your Current Organism:
Abyssisolibacter fermentans
NCBI taxonomy Id: 1766203
Other names: A. fermentans, Clostridiales bacterium MCWD3, KCTC 15524, strain MCWD3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.