STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001559865_01795Unannotated protein. (94 aa)    
Predicted Functional Partners:
GCA_001559865_01794
Unannotated protein.
       0.773
GCA_001559865_01796
Unannotated protein.
       0.773
GCA_001559865_01793
Unannotated protein.
       0.768
GCA_001559865_01791
Unannotated protein.
       0.663
GCA_001559865_01792
Unannotated protein.
       0.663
GCA_001559865_01790
Unannotated protein.
       0.654
GCA_001559865_01789
Unannotated protein.
       0.628
GCA_001559865_01788
Unannotated protein.
       0.518
GCA_001559865_01787
Unannotated protein.
       0.485
GCA_001559865_01784
Unannotated protein.
       0.445
Your Current Organism:
Abyssisolibacter fermentans
NCBI taxonomy Id: 1766203
Other names: A. fermentans, Clostridiales bacterium MCWD3, KCTC 15524, strain MCWD3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.