STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001559865_02689Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_001559865_01971
Unannotated protein.
  
 
 0.978
GCA_001559865_00457
Unannotated protein.
  
 0.977
GCA_001559865_01034
Unannotated protein.
  
 0.977
GCA_001559865_02724
Unannotated protein.
  
 0.977
GCA_001559865_03209
Unannotated protein.
  
 0.977
GCA_001559865_03067
Unannotated protein.
 
 0.951
GCA_001559865_01035
Unannotated protein.
 
 0.949
GCA_001559865_03138
Unannotated protein.
  
 0.942
GCA_001559865_01038
Unannotated protein.
 
 
0.938
GCA_001559865_02111
Unannotated protein.
 
 
0.937
Your Current Organism:
Abyssisolibacter fermentans
NCBI taxonomy Id: 1766203
Other names: A. fermentans, Clostridiales bacterium MCWD3, KCTC 15524, strain MCWD3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.