STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001559865_03503Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_001559865_01950
Unannotated protein.
    
 0.951
GCA_001559865_00528
Unannotated protein.
  
 
 0.921
GCA_001559865_01307
Unannotated protein.
  
 
 0.899
GCA_001559865_00721
Unannotated protein.
   
 0.881
GCA_001559865_00352
Unannotated protein.
   
  0.822
GCA_001559865_03502
Unannotated protein.
     
 0.786
GCA_001559865_02031
Unannotated protein.
  
 
 0.776
GCA_001559865_02261
Unannotated protein.
  
 
 0.776
GCA_001559865_00753
Unannotated protein.
  
 0.761
GCA_001559865_03500
Unannotated protein.
 
 
   0.640
Your Current Organism:
Abyssisolibacter fermentans
NCBI taxonomy Id: 1766203
Other names: A. fermentans, Clostridiales bacterium MCWD3, KCTC 15524, strain MCWD3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.