STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001559865_04214Unannotated protein. (220 aa)    
Predicted Functional Partners:
GCA_001559865_04213
Unannotated protein.
  
 0.975
GCA_001559865_04224
Unannotated protein.
  
 0.966
GCA_001559865_04212
Unannotated protein.
  
 
  0.950
GCA_001559865_03890
Unannotated protein.
  
 
 0.822
GCA_001559865_03717
Unannotated protein.
  
 
  0.749
GCA_001559865_02674
Unannotated protein.
  
 
  0.737
GCA_001559865_00202
Unannotated protein.
    
 0.722
GCA_001559865_03328
Unannotated protein.
    
  0.692
GCA_001559865_02172
Unannotated protein.
  
 
 0.683
GCA_001559865_03676
Unannotated protein.
  
 
 0.683
Your Current Organism:
Abyssisolibacter fermentans
NCBI taxonomy Id: 1766203
Other names: A. fermentans, Clostridiales bacterium MCWD3, KCTC 15524, strain MCWD3
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