STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW68670.1Choline-sulfatase. (504 aa)    
Predicted Functional Partners:
SCW74099.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
   0.945
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.763
SCW56558.1
Hypothetical protein.
  
 0.727
SCW93801.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.660
SCW68684.1
Glycine betaine/proline transport system substrate-binding protein.
 
     0.629
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.517
SCW67717.1
HEAT repeat-containing protein.
   
 
  0.516
SCW68700.1
Putative choline sulfate-utilization transcription factor; Manually curated; Belongs to the LysR transcriptional regulatory family.
 
     0.506
SCW82456.1
KDO2-lipid IV(A) lauroyltransferase.
    
  0.473
SCW30290.1
Undecaprenyl-diphosphatase.
    
  0.469
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.