node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
prfB | rmpF | FTT_0191 | FTT_1371 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 0.952 |
prfB | rnc | FTT_0191 | FTT_1555c | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.952 |
prfB | rplM | FTT_0191 | FTT_1273 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.972 |
prfB | rplQ | FTT_0191 | FTT_0351 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Similar to Q8DS37 50S ribosomal protein L17 from Streptococcus mutans (128 aa). FASTA: opt: 342 Z-score: 447.1 E(): 5.2e-17 Smith-Waterman score: 342; 50.000 identity in 128 aa overlap. | 0.964 |
prfB | rplS | FTT_0191 | FTT_0153 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.972 |
prfB | rplV | FTT_0191 | FTT_0330 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.943 |
prfB | rpmA | FTT_0191 | FTT_0773 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Similar to RL27_YERPE (Q8ZBA7) 50S ribosomal protein L27 from Yersinia pestis (85 aa). FASTA: opt: 431 Z-score: 607.3 E(): 6.2e-26 Smith-Waterman score: 431; 77.108 identity in 83 aa overlap; Belongs to the bacterial ribosomal protein bL27 family. | 0.983 |
prfB | rpsF | FTT_0191 | FTT_1062c | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.964 |
prfB | rpsI | FTT_0191 | FTT_1274 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Similar to RS9_XYLFT (Q87DD4) 30S ribosomal protein S9 from Xylella fastidiosa (strain Temecula1 / ATCC 700964) (130 aa). FASTA: opt: 587 Z-score: 765.1 E(): 1e-34 Smith-Waterman score: 587; 69.600identity in 125 aa overlap; Belongs to the universal ribosomal protein uS9 family. | 0.948 |
prfB | rpsO | FTT_0191 | FTT_0698 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.945 |
rmpF | prfB | FTT_1371 | FTT_0191 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.952 |
rmpF | rnc | FTT_1371 | FTT_1555c | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.948 |
rmpF | rplM | FTT_1371 | FTT_1273 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
rmpF | rplQ | FTT_1371 | FTT_0351 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Similar to Q8DS37 50S ribosomal protein L17 from Streptococcus mutans (128 aa). FASTA: opt: 342 Z-score: 447.1 E(): 5.2e-17 Smith-Waterman score: 342; 50.000 identity in 128 aa overlap. | 0.996 |
rmpF | rplS | FTT_1371 | FTT_0153 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
rmpF | rplV | FTT_1371 | FTT_0330 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.994 |
rmpF | rpmA | FTT_1371 | FTT_0773 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Similar to RL27_YERPE (Q8ZBA7) 50S ribosomal protein L27 from Yersinia pestis (85 aa). FASTA: opt: 431 Z-score: 607.3 E(): 6.2e-26 Smith-Waterman score: 431; 77.108 identity in 83 aa overlap; Belongs to the bacterial ribosomal protein bL27 family. | 0.996 |
rmpF | rpsF | FTT_1371 | FTT_1062c | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
rmpF | rpsI | FTT_1371 | FTT_1274 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Similar to RS9_XYLFT (Q87DD4) 30S ribosomal protein S9 from Xylella fastidiosa (strain Temecula1 / ATCC 700964) (130 aa). FASTA: opt: 587 Z-score: 765.1 E(): 1e-34 Smith-Waterman score: 587; 69.600identity in 125 aa overlap; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
rmpF | rpsO | FTT_1371 | FTT_0698 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |