STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0169Related to dissimilatory siroheme-sulfite reductase, gamma subunit. (153 aa)    
Predicted Functional Partners:
mnmA
Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.919
DP2965
Conserved hypothetical protein.
   
 0.919
DP0798
Probable dissimilatory sulfite reductase, beta subunit (DsrB).
 
 
 
 0.906
DP0797
Probable dissimilatory sulfite reductase, alpha subunit (DsrA).
 
 
 
 0.904
DP0997
Probable dissimilatory sulfite reductase, gamma subunit (DsrC).
  
     0.760
DP3074
Probable heterodisulfide reductase.
 
 
 
 0.744
DP3075
Hypothetical membrane protein.
 
   
 0.739
DP0249
Related to iron-sulfur proteins.
   
 
 0.635
DP1107
Quinone-modifying oxidoreductase, subunit QmoB; Probable fusion protein of heterodisulfide reductase, subunit A (HdrA) and hydrogenase, delta subunit (HydD).
  
   
 0.560
DP1009
Probable Fe-S oxidoreductase.
 
 
 
 0.550
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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