STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrfAProbable catalytic subunit of cytochrome c nitrite reductase; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (508 aa)    
Predicted Functional Partners:
DP0343
Probable small subunit of cytochrome c nitrite reductase.
 
 0.998
DP0572
Hypothetical protein.
  
  
  0.911
hcp
Probable prismane protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.911
hcp-2
Probable hybrid cluster prismane protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.911
hcp-3
Probable hybrid cluster prismane protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.911
DP0930
Probable glutamine synthetase.
     
 0.910
DP1198
Related to glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.905
DP2840
Probable NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.905
DP3075
Hypothetical membrane protein.
     
 0.904
DP1985
Similar to deca-heme c-type cytochrome.
  
 
 0.821
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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