STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0549Related to nitrite reductase. (205 aa)    
Predicted Functional Partners:
DP2110
Probable sulfate adenylyltransferase.
  
  
 0.999
DP1734
Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA).
 
  
 0.916
DP1472
Probable sulfate adenylyltransferase.
  
  
 0.755
DP1240
Probable cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.678
DP2624
Related to glutamate synthase, beta subunit.
  
  
 0.638
DP0562
Related to sulfate ABC transporter, permease protein.
  
  
 0.624
DP1351
Related to molybdenum ABC transporter, permease protein.
  
  
 0.624
DP3081
Related to siroheme synthase.
 
  
 0.620
DP0632
Probable glutamate synthase, beta subunit.
  
  
 0.560
DP0221
Probable precorrin-6Y C5,15-methyltransferase (CobL).
     
 0.541
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.