STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1031Probable amino acid ABC transporter, periplasmic substrate-binding protein. (255 aa)    
Predicted Functional Partners:
DP1028
Probable glutamine ABC transporter, permease protein.
  0.996
DP1030
Probable amino acid ABC transporter, permease protein.
  0.995
DP1029
Probable amino acid ABC transporter, ATP-binding protein.
 
 0.992
DP0090
Related to glutamine transport system permease protein (GlnP).
   0.973
DP0088
Related to glutamine transport system permease protein (GlnP).
   0.967
DP1983
Probable glutamine ABC-transporter, permease protein (GlnP).
 
 0.965
DP0990
Related to glutamine ABC transporter, permease protein.
   0.964
DP1560
Probable amino acid ABC transporter, permease protein.
   0.913
DP1982
Probable glutamine ABC-transporter, periplasmic substrate-binding protein (GlnH).
 
    
0.853
DP1984
Probable glutamine ABC-transporter, ATP-binding protein (GlnQ).
 
 
 0.805
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.