STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1669Unknown protein. (177 aa)    
Predicted Functional Partners:
DP0720
Hypothetical protein.
  
    0.740
DP0132
Hypothetical protein.
  
     0.657
DP0879
Conserved hypothetical protein.
  
     0.638
DP2190
Hypothetical protein.
  
     0.637
DP0091
Hypothetical protein.
  
     0.590
DP1093
Probable phosphoenolpyruvate carboxykinase.
  
     0.542
DP3099
Hypothetical membrane protein.
  
     0.517
DP1638
Conserved hypothetical protein.
  
     0.503
DP1458
Unknown protein.
  
     0.500
DP2081
Related to adenosine deaminase.
  
     0.482
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.