STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhDRelated to formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. (258 aa)    
Predicted Functional Partners:
DP0683
Probable NADP-reducing hydrogenase, 51 kDa subunit.
  
  
 0.835
DP0481
Probable formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.823
DP0682
Probable formate dehydrogenase, alpha chain.
 
 
 0.813
DP1769
Probable formate dehydrogenase, selenocysteine-containing chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.809
fhs
Probable formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.
 
   
 0.797
DP2229
Probable cysteine desulfurase (NifS); Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
 
 0.789
folD
Probable methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
 
 0.783
DP0326
Probable ammonium transporter.
   
  
 0.772
DP0349
Related to nitrogen regulatory protein P-II family proteins.
   
  
 0.769
DP2913
Probable rubredoxin.
   
  
 0.769
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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