Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DP2213 | rsmJ | DP2213 | DP2215 | Hypothetical protein. | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.409 |
coaD | rsmJ | DP2774 | DP2215 | Probable phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.585 |
rlmL | rsmJ | DP0739 | DP2215 | Conserved hypothetical protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.550 |
rsmJ | DP2213 | DP2215 | DP2213 | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Hypothetical protein. | 0.409 |
rsmJ | coaD | DP2215 | DP2774 | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Probable phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.585 |
rsmJ | rlmL | DP2215 | DP0739 | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Conserved hypothetical protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.550 |
rsmJ | uppP | DP2215 | DP2384 | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Related to undecaprenol kinase (bacitracin resistance protein); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.546 |
uppP | rsmJ | DP2384 | DP2215 | Related to undecaprenol kinase (bacitracin resistance protein); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.546 |