STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP2966Probable iron-dependent repressor. (168 aa)    
Predicted Functional Partners:
DP2967
Unknown protein.
       0.773
fur
Probable ferric uptake regulatory protein; Belongs to the Fur family.
  
  
 0.640
DP0329
Related to ABC transporter, ATP-binding protein.
    
   0.624
DP1042
Related to hydrogenase, component I-formate hydrogenlyase subunit 7.
    
   0.619
DP3062
Probable Mn/Zn ABC transporter, permease.
  
  
 0.505
DP3060
Related to Mn/Zn ABC transporter, periplasmic solute binding protein.
  
  
 0.502
DP1471
Probable heavy-metal transporting ATPase.
     
 0.474
DP3061
Related to Mn/Zn ABC transporter, ATP-binding protein.
  
  
 0.454
DP2260
Related to Mn2+ and Fe2+ transporters of the NRAMP family.
  
  
 0.440
DP0096
Probable GufA protein.
  
  
 0.431
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.