STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP3039Probable ethanolamine utilization protein (EutE). (475 aa)    
Predicted Functional Partners:
DP0941
Probable butanalol dehydrogenase.
   0.956
DP2157
Probable NADPH-dependent butanol dehydrogenase.
   0.956
pfor
Probable pyruvate-flavodoxin oxidoreductase.
  
 0.949
DP0558
Probable phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.928
DP3035
Probable ethanolamine utilization protein (EutD).
 
 
 0.928
DP1822
Related to acetaldehyde dehydrogenase.
  
  
 
0.927
acs
Probable acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
   
 0.926
acs-2
Probable acetyl-coenzyme A synthetase.
   
 0.926
DP2097
Probable acetyl-CoA synthetase.
 
 
 0.926
DPPB37
Probable acetyl-CoA synthetase.
 
 
 0.926
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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