STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900048895_00739Unannotated protein. (363 aa)    
Predicted Functional Partners:
GCA_900048895_00740
Unannotated protein.
 0.999
GCA_900048895_00741
Unannotated protein.
 
 0.993
GCA_900048895_00742
Unannotated protein.
 
 0.986
GCA_900048895_01931
Unannotated protein.
 0.985
GCA_900048895_01932
Unannotated protein.
 
 0.980
GCA_900048895_01933
Unannotated protein.
 
 0.975
GCA_900048895_00216
Unannotated protein.
 
  
 
0.948
GCA_900048895_00231
Unannotated protein.
 
  
 
0.948
GCA_900048895_03249
Unannotated protein.
 
   
 
0.946
GCA_900048895_00138
Unannotated protein.
 
   
 
0.943
Your Current Organism:
Neglecta timonensis
NCBI taxonomy Id: 1776382
Other names: CSUR P2265, Clostridium sp. SN17, DSM 102082, N. timonensis, strain SN17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.