STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120365_00036Unannotated protein. (419 aa)    
Predicted Functional Partners:
GCA_900120365_00035
Unannotated protein.
  
  0.996
GCA_900120365_00037
Unannotated protein.
 
     0.949
GCA_900120365_01103
Unannotated protein.
  
 
 0.941
GCA_900120365_00940
Unannotated protein.
  
 0.831
GCA_900120365_01153
Unannotated protein.
  
 0.781
GCA_900120365_00034
Unannotated protein.
 
     0.780
GCA_900120365_00038
Unannotated protein.
       0.773
GCA_900120365_00993
Unannotated protein.
    
  0.758
GCA_900120365_00219
Unannotated protein.
  
 0.717
GCA_900120365_00218
Unannotated protein.
  
 0.696
Your Current Organism:
Massilimicrobiota timonensis
NCBI taxonomy Id: 1776392
Other names: CSUR P2264, Candidatus Stoquefichus sp. SN16, DSM 101840, M. timonensis, Massiliomicrobiota timonensis, strain Marseille-P2264, strain SN16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.