STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120365_00498Unannotated protein. (445 aa)    
Predicted Functional Partners:
GCA_900120365_00497
Unannotated protein.
 
 0.996
GCA_900120365_00701
Unannotated protein.
 
0.996
GCA_900120365_00658
Unannotated protein.
 
 0.995
GCA_900120365_01170
Unannotated protein.
 
 
 0.990
GCA_900120365_01102
Unannotated protein.
  
 0.980
GCA_900120365_01172
Unannotated protein.
 
 
 0.973
GCA_900120365_00499
Unannotated protein.
  
 0.967
GCA_900120365_01169
Unannotated protein.
 
 
 0.964
GCA_900120365_00069
Unannotated protein.
 
  
 0.963
GCA_900120365_00500
Unannotated protein.
  
  
 0.961
Your Current Organism:
Massilimicrobiota timonensis
NCBI taxonomy Id: 1776392
Other names: CSUR P2264, Candidatus Stoquefichus sp. SN16, DSM 101840, M. timonensis, Massiliomicrobiota timonensis, strain Marseille-P2264, strain SN16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.